Nuno D. Mendes
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Publications
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Software
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Documents
http://nunomendes.eu/
Research Interests
Development of pipelines for the identification of miRNAs and their targets, based on genome sequence analysis and RNA-seq data. Development of web-based tools to access repositories of biological data. Design and implementation of ontologies to meaningfully represent biological concepts, experimental assays and other meta-data. Qualitative modelling of gene regulatory networks and exploration of the corresponding dynamics.
Teaching
2014: Genome Sequence Analysis at PhD Program in Molecular Biosciences, ITQB/UNL, Oeiras, Portugal
2011/2012 (Spring semester): Authoring and Information Retrieval at
ISEGI-UNL
2006: Introduction to Programming using Python at PhD Program in Computational Biology, IGC, Oeiras, Portugal 2004/2005 (Spring semester): Compilers at IST/UTL, Lisbon, Portugal 2004/2005 (Fall semester): Object-Oriented Programming at IST/UTL, Lisbon, Portugal
Short Curriculum
2017-
Senior Software Engineer at
Pentaho
2016-2017:
Software Engineer and Head of R&D at
Findmore
2014-2016:
Consultant at
Bold International
2014-2014:
Head of IT at
HeartGenetics
2010-2014:
Associate Researcher at the
KDBIO group
-
INESC-ID Lisboa
.
2013-2014:
Postdoctoral Fellow at the
Forest Biotech Lab
-
iBET
2012-2013:
Postdoctoral Fellow at the
Network Modelling group
-
Instituto Gulbenkian de Ciência
.
2010-2011:
Postdoctoral fellow at the
KDBIO group
-
INESC-ID Lisboa
.
2006-2011:
Dual PhD from
Instituto Superior Técnico
and
Université Claude Bernard Lyon 1
.
Hosted by the
BAOBAB Group
at
LBBE
, France.
2005-2006:
Student of the
PhD Program in Computational Biology
at
Instituto Gulbenkian de Ciência
.
2005:
MSc from
Instituto Superior Técnico
in Information Systems and Computer Engineering.
2003:
BSc from
Instituto Superior Técnico
in Information Systems and Computer Engineering.
Index -
Publications
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Software
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Documents